EMBOSS explorer

trimseq

Trim ambiguous bits off the ends of sequences (read the manual)

Unshaded fields are optional and can safely be ignored. (hide optional fields)

Input section

Select an input sequence. Use one of the following three fields:

  1. To access a sequence from a database, enter the USA here:
  2. To upload a sequence from your local computer, select it here:
  3. To enter the sequence data manually, type here:
Additional section
Window size
Percent threshold of ambiguity in window
Trim off all ambiguity codes, not just N or X?
Trim off asterisks?
Advanced section
Trim at the start?
Trim at the end?
Output section
Output sequence format
Run section
Email address: If you are submitting a long job and would like to be informed by email when it finishes, enter your email address here.