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GCG±`°Ý°ÝÃD -> Refseq |
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¦bNCBIªºEntrez©ÎBLAST©Ò§ä¨ìªº§Ç¦CGCG ùØ«o§ä¤£¨ì ? |
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¥X ²{ ³o ºØ ±¡ §Î ¦³ ¥i ¯à ¬O ±o ¨ì ªº §Ç ¦C ¤Ó ·s ©Î ¬O ¤ñ ¹ï ¨ì ªº ¬O NCBI ¯S ¦³ ªº ¸ê ®Æ ®w ªº §Ç ¦C , ¨Ò ¦p RefSeq ¸ê ®Æ ®w¡C |
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RefSeq Database |
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RefSeq ¸ê ®Æ ®w ¬O NCBI ±N GenBank ªº §Ç ¦C ¦A °µ ¸Ô ²Ó ¾ã ²z ªº non-redundent §Ç ¦C ¸ê ®Æ ®w , ¥¦ ªº §Ç ¦C ®æ ¦¡ ©M GenBank ´X ¥G §¹ ¥þ ¬Û ¦P , ¦ý ¦] ¬° ¬O §¹ ¥þ ¤£ ¦P ªº ¿W ¥ß ¸ê ®Æ ®w , ¬° »P GenBank °Ï §O , RefSeq ªºAccession Number ®æ ¦¡ ©M GenBank ¤£ ¦P , ·| ¬O ¡G
NT_123456¡@¡@ |
constructed genomic contigs |
NM_123456¡@¡@ |
mRNAs |
NP_123456¡@¡@ |
proteins |
NC_123456¡@¡@ |
chromosome |
°² ¨Ï ±o ¨ì ªº output file ¤¤ ¦³ ref , ´N ¥N ªí ©Ò §ä ¨ì ªº ¬O RefSeq ¸ê ®Æ ®w ªº §Ç ¦C :
¡@¡@¡@ref|NM_00014|A2M| Homo sapiens alpha-2-ma....
¡@¡@¡@gi|4557284|ref|NM_00646.1|[4557284]
¦] ¬° NCBI ªº Entrez ©M BLAST ³£ ©ñ ¤J ¤F ³o Ó ¸ê ®Æ ®w , ¦ý ²{ ¦b GCG ¨Ã ¨S ¦³ ¥[ ¤J ³o Ó ¸ê ®Æ ®w , ©Ò ¥H ·| ¦³ §ä ¤£ ¨ì ªº ±¡ §Î ¡C |
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¸Ñ ¨M ¤è ªk |
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¤£ ºÞ ¬O ¦ó ºØ ì ¦] , ¸Ñ ¨M ªº ¤è ªk ´N ¬O §Q ¥Î NetFetch±N ³o Ó §Ç ¦C «þ ¨© ¤@ ¥÷ ¦^ ¨Ó , ¦ý ¬O ³o Ó ÀÉ ®× GCG µL ªk ª½ ±µ Ū ¨ú , n ±N ¥¦ Reformat «á ¤~ ¯à ¥Î , reformat ®É ½Ð °O ±o ¦b ³o Ó NetFetch ¦^ ¨Ó ªº rsf ÀÉ «á ± ¥[ ¤W {*}¡C½Ð °Ñ ¦Ò ¤U ¦C ¨Ò ¤l ¡G
gcg2 1%netfetch NM_000014
NetFetch retrieves sequences from NCBI listed in a NetBLAST output file. You can also use it to retrieve sequences individually by sequence name or accession number. The output of NetFetch is an RSF file.
¡@ What should I call the RSF output file (* nm_000014.rsf *) ?
¡@ NETFETCH complete with:
¡@¡@ Output: nm_000014.rsf
¡@¡@ Server: www.ncbi.nlm.nih.gov
¡@¡@ Requested: 1
¡@¡@ Returned: 1
gcg2 2% reformat nm_000014.rsf{*}
Reformat rewrites sequence file(s), scoring matrix file(s), or enzyme data file(s) so that they can be read by GCG programs.
¡@¡@ nm_000014.seq ¡@ length: 4577 bp
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¨ä ¥L ¥Î ªk |
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Y ¬O ¨Ï ¥Î ¤F GCG ¤¤ ªº NetBlast , ¤] ¥i ¥H ¤W z ¤è ¦¡ ±N ©Ò n ªº §Ç ¦C «þ ¨© ¤@ ¥÷ ¦^ ¨Ó , ¦Ó ¥B ¥i ¥H NetBlast ªº output ª½ ±µ °µ ¬° NetFetch ªº input, Reformat «á ·| ¦Û °Ê ¸Ñ ¶} ¦¨ ¦h Ó §Ç ¦C ÀÉ ¡C
NetFetch ¦] ¬° ¬O §Q ¥Î ¤F NCBI ¤¤ ªº Entrez ¨Ó ¨ú ±o §Ç ¦C , ©Ò ¥H Y ¬O NetBLAST ©Ò ±o ªº §Ç ¦C ¤£ ¦b Entrez ¤¤ ´N ¦³ ¥i ¯à ÁÙ ¬O §ä ¤£ ¨ì , ¨Ò ¦p Alu Datebase ¤¤ ªº §Ç ¦C ¡C |
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