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April 5th, 2004
Session I : Genomics and Genome Comparison
Chair: Professor Shih-Feng Tsai Division of Molecular and Genomic Medicine, National Health Research Institutes, Taipei, Taiwan, ROC
09:20-09:50
New Models and Algorithms for Genome Comparison Professor Jens Stoye
Video
Session II : Bioinformatics in Functional Genomics
Chair: Professor Chao A. Hsiung Division of Biostatistics and Bioinformatics, National Health Research Institutes, Taipei, Taiwan, ROC
10:40-11:10
Methods for the Analysis of Gene Expression Data and Biochemical Networks Professor Ralf Zimmer
Video
11:10-11:40	Vertebrate Hox Gene Clusters and the Evolution of Phylogenetic Footprints Professor Peter Stadler	Video
11:40-12:10	Normalization for cDNA Microarray Experiments Having Many Differentially Expressed Genes Professor I-Shou Chang	Video
Session III : Proteomics
Chair: Professor Ming-Shi Chang Department of Biochemistry, National Cheng Kung University Medical College, Tainan, Taiwan, ROC
14:00-14:30	Protein Scoring Functions: Empiricism, Optimization and Optimism Professor Andrew Torda	Video
14:30-15:00	Peaks, Peptides, Computers -- Bioinformatics in the Analysis of HPLC/MS Proteomics Data Professor Knut Reinert	Video
15:30-16:00	Computational Proteomics and ‘Encyclopedia of Life’ Project Professor Cheng-Yan Kao	Video
16:00-16:30	Matrix Visualization and Information Mining for Genomics/Proteomics Data Structure Dr. Chun-Houh Chen
Video
16:30-17:00	Discussion
April 6th, 2004
Session IV : Structural Bioinformatics
Chair: Professor Chen-Hsin Chen Institute of Statistical Science, Academia Sinica; Graduate Institute of Epidemiology, College of Public Health, National Taiwan University, Taipei, Taiwan, ROC
09:30-10:00	SARST-Structure Alignment by Ramachandran Search Tool Professor Ping-Chiang Lyu	Video
10:00-10:30	Prediction of Protein Secondary Structures Professor Wen-Lian Hsu	Video
Session V : Protein Interactions
Chair: Dr. Chang-Huain Hsieh National Center of High-performance Computing (NCHC), HsinChu, Taiwan, ROC
11:00-11:30	A Combined Experimental and Inferring Interactomes Dr. Chung-Yen Lin / Professor Chao Agnes Hsiung	Video
11:30-12:00	High-Accuracy Prediction of Protein-Carbohydrate Interactions Professor Oliver Kohlbacher	Video
Session VII : Systems Biology
Chair: Professor Chen-Kung Chou Department of Medical Research and Education, Veteran's General Hospital-Taipei;Institute of Biochemistry, National Yang Ming University, Taipei, Taiwan, ROC
15:00-15:30	Towards Molecular Systems Biology: Dynamic Simulations of Multiprotein Systems Professor Volkhard Helms	Video
15:30-16:00	Metabolome Analysis and Enzyme Information in Systems Biology Professor Dietmar Schomburg	Video